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| U | Kalmar FF | - | FC Twente | 1:0 (0:0) | ||
| R | FC Twente | - | Kalmar FF | 3:1 (0:0) | ||
| U: 15.07.2006 16:00 | R: 22.07.2006 15:30 | Winnaars: FC Twente | ||||
| U | Newcastle United | - | Lillestrøm SK | 1:1 (0:1) | ||
| R | Lillestrøm SK | - | Newcastle United | 0:3 (0:2) | ||
| U: 15.07.2006 18:00 | R: 22.07.2006 16:00 | Winnaars: Newcastle United | ||||
| U | Odense BK | - | Hibernian FC | 1:0 (1:0) | ||
| R | Hibernian FC | - | Odense BK | 2:1 (0:0) | ||
| U: 15.07.2006 18:00 | R: 22.07.2006 16:00 | Winnaars: Odense BK | ||||
| U | Maccabi Petach-Tikva | - | Ethnikos Achna | 0:2 (0:0) | ||
| R | Ethnikos Achna | - | Maccabi Petach-Tikva | 2:3 (0:2) | ||
| U: 15.07.2006 18:00 | R: 22.07.2006 17:00 | Winnaars: Ethnikos Achna | ||||
| U | Grasshopper Club Zürich | - | KAA Gent | 2:1 (0:1) | ||
| R | KAA Gent | - | Grasshopper Club Zürich | 1:1 (0:0) | ||
| U: 15.07.2006 19:00 | R: 22.07.2006 19:30 | Winnaars: Grasshopper Club Zürich | ||||
| U | SV Ried | - | FC Tiraspol | 3:1 (1:0) | ||
| R | FC Tiraspol | - | SV Ried | 1:1 (0:1) | ||
| U: 15.07.2006 19:00 | R: 22.07.2006 19:00 | Winnaars: SV Ried | ||||
| U | AE Lárissa | - | Kayserispor | 0:0 (0:0) | ||
| R | Kayserispor | - | AE Lárissa | 2:0 (1:0) | ||
| U: 15.07.2006 20:45 | R: 22.07.2006 17:00 | Winnaars: Kayserispor | ||||
| U | Olympique Marseille | - | Dnipro Dnipropetrovsk | 0:0 (0:0) | ||
| R | Dnipro Dnipropetrovsk | - | Olympique Marseille | 2:2 (0:0) | ||
| U: 15.07.2006 20:45 | R: 22.07.2006 17:00 | Winnaars: Olympique Marseille | ||||
| U | AJ Auxerre | - | Farul Constanța | 4:1 (2:1) | ||
| R | Farul Constanța | - | AJ Auxerre | 1:0 (0:0) | ||
| U: 15.07.2006 21:00 | R: 22.07.2006 18:00 | Winnaars: AJ Auxerre | ||||
| U | Villarreal CF | - | NK Maribor | 1:2 (0:1) | ||
| R | NK Maribor | - | Villarreal CF | 1:1 (0:0) | ||
| U: 15.07.2006 21:45 | R: 22.07.2006 20:00 | Winnaars: NK Maribor | ||||
| U | Hertha BSC | - | FK Moskva | 0:0 (0:0) | ||
| R | FK Moskva | - | Hertha BSC | 0:2 (0:1) | ||
| U: 16.07.2006 15:00 | R: 22.07.2006 17:00 | Winnaars: Hertha BSC | ||||
