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| 17.05.2009 | 14:00 | Hansa Rostock | - | 1. FC Nürnberg | 0:0 (0:0) | |
| 14:00 | 1. FC Kaiserslautern | - | MSV Duisburg | 3:5 (0:3) | ||
| 14:00 | SpVgg Greuther Fürth | - | 1. FSV Mainz 05 | 0:2 (0:0) | ||
| 14:00 | Rot-Weiß Oberhausen | - | SC Freiburg | 1:0 (0:0) | ||
| 14:00 | TSV 1860 München | - | Alemannia Aachen | 1:1 (1:0) | ||
| 14:00 | FC Augsburg | - | SV Wehen Wiesbaden | 1:1 (0:0) | ||
| 14:00 | TuS Koblenz | - | FC St. Pauli | 2:1 (2:1) | ||
| 14:00 | VfL Osnabrück | - | Rot Weiss Ahlen | 2:2 (1:1) | ||
| 14:00 | FSV Frankfurt | - | FC Ingolstadt 04 | 1:1 (0:0) |
| # | Team | GS. | W. | G. | V. | Dp. | Ds. | P. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
SC Freiburg | 33 | 20 | 5 | 8 | 56:33 | 23 | 65 |
| 2 |
|
1. FSV Mainz 05 | 33 | 17 | 9 | 7 | 58:37 | 21 | 60 |
| 3 |
|
1. FC Nürnberg | 33 | 15 | 12 | 6 | 49:28 | 21 | 57 |
| 4 |
|
Alemannia Aachen | 33 | 15 | 8 | 10 | 54:38 | 16 | 53 |
| 5 |
|
SpVgg Greuther Fürth | 33 | 15 | 8 | 10 | 56:44 | 12 | 53 |
| 6 |
|
MSV Duisburg | 33 | 13 | 13 | 7 | 52:35 | 17 | 52 |
| 7 |
|
1. FC Kaiserslautern | 33 | 15 | 7 | 11 | 50:44 | 6 | 52 |
| 8 |
|
FC St. Pauli | 33 | 13 | 6 | 14 | 50:59 | -9 | 45 |
| 9 |
|
Rot-Weiß Oberhausen | 33 | 11 | 9 | 13 | 35:50 | -15 | 42 |
| 10 |
|
Rot Weiss Ahlen | 33 | 11 | 8 | 14 | 36:53 | -17 | 41 |
| 11 |
|
FC Augsburg | 33 | 10 | 10 | 13 | 43:42 | 1 | 40 |
| 12 |
|
TSV 1860 München | 33 | 9 | 12 | 12 | 43:44 | -1 | 39 |
| 13 |
|
TuS Koblenz | 33 | 11 | 8 | 14 | 47:53 | -6 | 38 |
| 14 |
|
FSV Frankfurt | 33 | 9 | 11 | 13 | 34:45 | -11 | 38 |
| 15 |
|
Hansa Rostock | 33 | 8 | 13 | 12 | 51:52 | -1 | 37 |
| 16 |
|
VfL Osnabrück | 33 | 8 | 12 | 13 | 40:56 | -16 | 36 |
| 17 |
|
FC Ingolstadt 04 | 33 | 6 | 10 | 17 | 34:54 | -20 | 28 |
| 18 |
|
SV Wehen Wiesbaden | 33 | 5 | 11 | 17 | 27:48 | -21 | 26 |
| Promotie | |
| Promotie en degradatie | |
| Promotie en degradatie | |
| Degradatie |
