| 1. Ronde | 09.08.2024 | FC Zlín [B-jun] | - | Vysočina Jihlava [B-jun] | 2:2 |  |
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| 4. Ronde | 30.08.2024 | Slavia Praag [B-jun] | - | FC Zlín [B-jun] | 9:1 | ||||
| 14. Ronde | 09.11.2024 | FC Zlín [B-jun] | - | FK Dukla Praha [B-jun] | 1:2 | ||||
| 15. Ronde | 16.11.2024 | Viktoria Plzeň [B-jun] | - | FC Zlín [B-jun] | 2:2 | ||||
| 23. Ronde | 26.04.2025 | FC Zlín [B-jun] | - | 1. FC Slovácko [B-jun] | 2:3 | ||||
| 24. Ronde | 03.05.2025 | Sparta Praag [B-jun] | - | FC Zlín [B-jun] | 3:1 | ||||
| 26. Ronde | 17.05.2025 | FC Zlín [B-jun] | - | FC Zbrojovka Brno [B-jun] | 1:2 | ||||
| 27. Ronde | 25.05.2025 | Banik Ostrava [B-jun] | - | FC Zlín [B-jun] | 2:3 | ||||
| 28. Ronde | 31.05.2025 | FC Zlín [B-jun] | - | Dynamo České Budějovice [B-jun] | 0:4 | ||||
| 29. Ronde | 06.06.2025 | FK Dukla Praha [B-jun] | - | FC Zlín [B-jun] | 2:0 |
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