| 6. Ronde | 11.04.2021 | Tallinna JK Legion | - | FC Flora | 1:2 | ||||
| 10. Ronde | 30.04.2021 | FC Kuressaare | - | FC Flora | 0:4 |  |
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| 11. Ronde | 05.05.2021 | JK Nõmme Kalju | - | FC Flora | 1:2 | ||||
| 12. Ronde | 08.05.2021 | FC Flora | - | Tallinna JK Legion | 2:1 | ||||
| 14. Ronde | 19.05.2021 | FCI Levadia | - | FC Flora | 2:4 | |
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| 15. Ronde | 26.05.2021 | JK Narva Trans | - | FC Flora | 0:2 | |
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| 16. Ronde | 29.05.2021 | FC Flora | - | Tulevik Viljandi | 3:0 | ||||
| 3. Ronde | 21.06.2021 | JK Tammeka | - | FC Flora | 0:3 | ||||
| 2. Ronde | 25.06.2021 | FC Flora | - | JK Nõmme Kalju | 1:0 | ||||
| 18. Ronde | 30.06.2021 | FC Flora | - | Paide Linnameeskond | 3:3 | |
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| 17. Ronde | 16.07.2021 | Pärnu JK Vaprus | - | FC Flora | 0:4 | ||||
| 5. Ronde | 31.07.2021 | Paide Linnameeskond | - | FC Flora | 0:0 | ||||
| 20. Ronde | 14.08.2021 | FC Kuressaare | - | FC Flora | 1:0 | ||||
| 22. Ronde | 29.08.2021 | FC Flora | - | Tallinna JK Legion | 5:1 | ||||
| 24. Ronde | 19.09.2021 | FC Flora | - | JK Nõmme Kalju | 2:0 | ||||
| 25. Ronde | 26.09.2021 | Tulevik Viljandi | - | FC Flora | 2:2 | ||||
| 26. Ronde | 03.10.2021 | FC Flora | - | JK Tammeka | 3:0 | |
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| 4. Ronde | 24.10.2021 | FC Flora | - | FC Kuressaare | 2:2 | ||||
| 21. Ronde | 01.12.2021 | FCI Levadia | - | FC Flora | 1:5 |
Estland