| 3. Ronde | 23.08.2008 | Huddersfield Town | - | Milton Keynes Dons | 1:3 | ||||
| 4. Ronde | 30.08.2008 | Milton Keynes Dons | - | Swindon Town | 1:2 | ||||
| 5. Ronde | 06.09.2008 | Milton Keynes Dons | - | Yeovil Town | 3:0 | ||||
| 6. Ronde | 13.09.2008 | Oldham Athletic | - | Milton Keynes Dons | 2:0 | ||||
| 13. Ronde | 25.10.2008 | Milton Keynes Dons | - | Cheltenham Town | 3:1 | ||||
| 15. Ronde | 01.11.2008 | Milton Keynes Dons | - | Tranmere Rovers | 1:0 |  |
|||
| 29. Ronde | 31.01.2009 | Cheltenham Town | - | Milton Keynes Dons | 3:5 | ||||
| 30. Ronde | 03.02.2009 | Stockport County | - | Milton Keynes Dons | 0:1 | ||||
| 33. Ronde | 21.02.2009 | Tranmere Rovers | - | Milton Keynes Dons | 1:1 | ||||
| 34. Ronde | 28.02.2009 | Milton Keynes Dons | - | Leicester City | 2:2 | ||||
| 38. Ronde | 14.03.2009 | Milton Keynes Dons | - | Oldham Athletic | 6:2 | ||||
| 39. Ronde | 21.03.2009 | Yeovil Town | - | Milton Keynes Dons | 0:0 | |
|||
| 42. Ronde | 10.04.2009 | Southend United | - | Milton Keynes Dons | 0:2 |
Frankrijk