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| 16.04.1999 | 19:00 | VfB Leipzig | - | Rot-Weiß Erfurt | 2:0 (2:0) | |
| 17.04.1999 | 14:00 | FSV Zwickau | - | Stahl Eisenhüttenstadt | 3:0 (1:0) | |
| 14:00 | 1. FC Union Berlin | - | Dynamo Dresden | 2:2 (1:1) | ||
| 14:00 | FC Carl Zeiss Jena | - | Sachsen Leipzig | 3:1 (3:1) | ||
| 14:00 | Dresdner SC | - | FC Berlin | 1:2 (0:1) | ||
| 14:00 | SV Babelsberg 03 | - | Erzgebirge Aue | 2:1 (1:0) | ||
| 15:00 | SD Croatia Berlin | - | Spandauer SV | 2:1 (1:1) | ||
| 18.04.1999 | 14:00 | VFC Plauen | - | Lok Altmark Stendal | 0:2 (0:0) | |
| 20:15 | 1. FC Magdeburg | - | Chemnitzer FC | 0:1 (0:1) |
| # | Team | GS. | W. | G. | V. | Dp. | Ds. | P. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Chemnitzer FC | 30 | 20 | 7 | 3 | 51:12 | 39 | 67 |
| 2 |
|
VfB Leipzig | 30 | 19 | 5 | 6 | 51:26 | 25 | 62 |
| 3 |
|
FSV Zwickau | 30 | 18 | 6 | 6 | 50:27 | 23 | 60 |
| 4 |
|
1. FC Union Berlin | 30 | 17 | 5 | 8 | 54:19 | 35 | 56 |
| 5 |
|
1. FC Magdeburg | 30 | 15 | 9 | 6 | 45:29 | 16 | 54 |
| 6 |
|
VFC Plauen | 30 | 14 | 10 | 6 | 48:36 | 12 | 52 |
| 7 |
|
Erzgebirge Aue | 30 | 14 | 6 | 10 | 41:32 | 9 | 48 |
| 8 |
|
FC Berlin | 30 | 13 | 8 | 9 | 42:34 | 8 | 47 |
| 9 |
|
FC Carl Zeiss Jena | 30 | 13 | 7 | 10 | 33:29 | 4 | 46 |
| 10 |
|
Rot-Weiß Erfurt | 30 | 11 | 9 | 10 | 35:38 | -3 | 42 |
| 11 |
|
Lok Altmark Stendal | 30 | 10 | 4 | 16 | 29:48 | -19 | 34 |
| 12 |
|
SV Babelsberg 03 | 30 | 7 | 10 | 13 | 32:45 | -13 | 31 |
| 13 |
|
Sachsen Leipzig | 30 | 7 | 10 | 13 | 39:54 | -15 | 31 |
| 14 |
|
Dynamo Dresden | 30 | 7 | 7 | 16 | 32:42 | -10 | 28 |
| 15 |
|
Dresdner SC | 30 | 6 | 8 | 16 | 24:48 | -24 | 26 |
| 16 |
|
Spandauer SV | 30 | 6 | 7 | 17 | 25:45 | -20 | 25 |
| 17 |
|
SD Croatia Berlin | 30 | 6 | 2 | 22 | 19:54 | -35 | 20 |
| 18 |
|
Stahl Eisenhüttenstadt | 30 | 3 | 8 | 19 | 28:60 | -32 | 17 |
