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| 05.04.2007 | 18:00 | Erzgebirge Aue | - | 1. FC Köln | 0:1 (0:0) | |
| 18:00 | Hansa Rostock | - | SC Paderborn 07 | 2:0 (1:0) | ||
| 18:15 | TuS Koblenz | - | Rot-Weiss Essen | 0:1 (0:0) | ||
| 08.04.2007 | 14:00 | Wacker Burghausen | - | 1. FC Kaiserslautern | 0:0 (0:0) | |
| 14:00 | MSV Duisburg | - | Kickers Offenbach | 4:0 (2:0) | ||
| 14:00 | SpVgg Unterhaching | - | Eintracht Braunschweig | 3:2 (3:2) | ||
| 14:00 | SpVgg Greuther Fürth | - | FC Carl Zeiss Jena | 2:0 (0:0) | ||
| 14:00 | SC Freiburg | - | FC Augsburg | 2:0 (2:0) | ||
| 09.04.2007 | 20:15 | TSV 1860 München | - | Karlsruher SC | 2:0 (0:0) |
| # | Team | GS. | W. | G. | V. | Dp. | Ds. | P. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Karlsruher SC | 28 | 17 | 6 | 5 | 58:33 | 25 | 57 |
| 2 |
|
Hansa Rostock | 28 | 14 | 12 | 2 | 42:22 | 20 | 54 |
| 3 |
|
MSV Duisburg | 28 | 13 | 10 | 5 | 54:33 | 21 | 49 |
| 4 |
|
SpVgg Greuther Fürth | 28 | 14 | 6 | 8 | 46:30 | 16 | 48 |
| 5 |
|
SC Freiburg | 28 | 13 | 9 | 6 | 43:33 | 10 | 48 |
| 6 |
|
1. FC Kaiserslautern | 28 | 11 | 11 | 6 | 35:27 | 8 | 44 |
| 7 |
|
FC Augsburg | 28 | 11 | 9 | 8 | 34:25 | 9 | 42 |
| 8 |
|
Erzgebirge Aue | 28 | 13 | 3 | 12 | 40:39 | 1 | 42 |
| 9 |
|
1. FC Köln | 28 | 11 | 8 | 9 | 41:37 | 4 | 41 |
| 10 |
|
TSV 1860 München | 28 | 12 | 5 | 11 | 39:39 | 0 | 41 |
| 11 |
|
SC Paderborn 07 | 28 | 8 | 9 | 11 | 26:30 | -4 | 33 |
| 12 |
|
TuS Koblenz | 28 | 8 | 8 | 12 | 28:37 | -9 | 32 |
| 13 |
|
Kickers Offenbach | 28 | 8 | 6 | 14 | 34:47 | -13 | 30 |
| 14 |
|
Rot-Weiss Essen | 28 | 7 | 7 | 14 | 30:35 | -5 | 28 |
| 15 |
|
SpVgg Unterhaching | 28 | 7 | 7 | 14 | 28:42 | -14 | 28 |
| 16 |
|
Wacker Burghausen | 28 | 6 | 9 | 13 | 33:53 | -20 | 27 |
| 17 |
|
FC Carl Zeiss Jena | 28 | 6 | 8 | 14 | 28:48 | -20 | 26 |
| 18 |
|
Eintracht Braunschweig | 28 | 3 | 7 | 18 | 14:43 | -29 | 16 |
