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| 14.04.2000 | 19:00 | Stuttgarter Kickers | - | Waldhof Mannheim | 3:0 (0:0) | |
| 19:00 | Alemannia Aachen | - | Chemnitzer FC | 0:1 (0:0) | ||
| 19:00 | FC St. Pauli | - | 1. FC Nürnberg | 0:0 (0:0) | ||
| 15.04.2000 | 15:30 | Energie Cottbus | - | TeBe Berlin | 2:0 (1:0) | |
| 16.04.2000 | 14:45 | 1. FC Köln | - | 1. FSV Mainz 05 | 1:0 (1:0) | |
| 15:00 | Rot-Weiß Oberhausen | - | Fortuna Köln | 4:0 (2:0) | ||
| 15:00 | Karlsruher SC | - | Hannover 96 | 1:3 (1:1) | ||
| 15:00 | SpVgg Greuther Fürth | - | Kickers Offenbach | 1:1 (1:1) | ||
| 17.04.2000 | 20:15 | VfL Bochum | - | Bor. Mönchengladbach | 2:2 (1:1) |
| # | Team | GS. | W. | G. | V. | Dp. | Ds. | P. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
1. FC Köln | 27 | 15 | 7 | 5 | 51:26 | 25 | 52 |
| 2 |
|
VfL Bochum | 27 | 14 | 6 | 7 | 47:36 | 11 | 48 |
| 3 |
|
Energie Cottbus | 27 | 14 | 3 | 10 | 50:33 | 17 | 45 |
| 4 |
|
1. FC Nürnberg | 27 | 12 | 8 | 7 | 43:39 | 4 | 44 |
| 5 |
|
Bor. Mönchengladbach | 27 | 10 | 11 | 6 | 43:33 | 10 | 41 |
| 6 |
|
Alemannia Aachen | 27 | 10 | 9 | 8 | 36:41 | -5 | 39 |
| 7 |
|
Hannover 96 | 27 | 10 | 7 | 10 | 42:41 | 1 | 37 |
| 8 |
|
TeBe Berlin | 27 | 9 | 10 | 8 | 33:35 | -2 | 37 |
| 9 |
|
Waldhof Mannheim | 27 | 8 | 12 | 7 | 38:39 | -1 | 36 |
| 10 |
|
Chemnitzer FC | 27 | 9 | 8 | 10 | 35:37 | -2 | 35 |
| 11 |
|
Rot-Weiß Oberhausen | 27 | 8 | 10 | 9 | 31:30 | 1 | 34 |
| 12 |
|
1. FSV Mainz 05 | 27 | 7 | 11 | 9 | 32:32 | 0 | 32 |
| 13 |
|
SpVgg Greuther Fürth | 27 | 6 | 14 | 7 | 29:33 | -4 | 32 |
| 14 |
|
FC St. Pauli | 27 | 6 | 13 | 8 | 26:31 | -5 | 31 |
| 15 |
|
Kickers Offenbach | 27 | 6 | 11 | 10 | 27:38 | -11 | 29 |
| 16 |
|
Stuttgarter Kickers | 27 | 7 | 7 | 13 | 39:49 | -10 | 28 |
| 17 |
|
Fortuna Köln | 27 | 5 | 11 | 11 | 25:39 | -14 | 26 |
| 18 |
|
Karlsruher SC | 27 | 3 | 10 | 14 | 30:45 | -15 | 19 |
