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| 28.09.2012 | 18:00 | SC Paderborn 07 | - | 1. FC Köln | 1:2 (0:1) | |
| 18:00 | VfR Aalen | - | FSV Frankfurt | 3:0 (1:0) | ||
| 18:00 | Jahn Regensburg | - | FC St. Pauli | 3:0 (2:0) | ||
| 29.09.2012 | 13:00 | TSV 1860 München | - | SV Sandhausen | 4:0 (3:0) | |
| 13:00 | 1. FC Union Berlin | - | Energie Cottbus | 3:1 (1:0) | ||
| 30.09.2012 | 13:30 | 1. FC Kaiserslautern | - | Eintracht Braunschweig | 1:1 (1:0) | |
| 13:30 | Dynamo Dresden | - | Erzgebirge Aue | 3:1 (2:0) | ||
| 13:30 | VfL Bochum | - | FC Ingolstadt 04 | 1:1 (0:1) | ||
| 01.10.2012 | 20:15 | MSV Duisburg | - | Hertha BSC | 2:2 (0:1) |
| # | Team | GS. | W. | G. | V. | Dp. | Ds. | P. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Eintracht Braunschweig | 8 | 6 | 2 | 0 | 13:3 | 10 | 20 |
| 2 |
|
Energie Cottbus | 8 | 5 | 2 | 1 | 14:8 | 6 | 17 |
| 3 |
|
TSV 1860 München | 8 | 4 | 4 | 0 | 13:3 | 10 | 16 |
| 4 |
|
1. FC Kaiserslautern | 8 | 4 | 4 | 0 | 14:9 | 5 | 16 |
| 5 |
|
VfR Aalen | 8 | 5 | 0 | 3 | 12:8 | 4 | 15 |
| 6 |
|
Hertha BSC | 8 | 4 | 3 | 1 | 13:10 | 3 | 15 |
| 7 |
|
FSV Frankfurt | 8 | 4 | 2 | 2 | 12:10 | 2 | 14 |
| 8 |
|
FC Ingolstadt 04 | 8 | 3 | 3 | 2 | 10:10 | 0 | 12 |
| 9 |
|
SC Paderborn 07 | 8 | 3 | 1 | 4 | 14:11 | 3 | 10 |
| 10 |
|
Jahn Regensburg | 8 | 3 | 0 | 5 | 8:7 | 1 | 9 |
| 11 |
|
VfL Bochum | 8 | 2 | 3 | 3 | 5:9 | -4 | 9 |
| 12 |
|
Dynamo Dresden | 8 | 2 | 2 | 4 | 11:12 | -1 | 8 |
| 13 |
|
1. FC Union Berlin | 8 | 2 | 2 | 4 | 11:13 | -2 | 8 |
| 14 |
|
1. FC Köln | 8 | 2 | 2 | 4 | 6:9 | -3 | 8 |
| 15 |
|
FC St. Pauli | 8 | 1 | 3 | 4 | 4:10 | -6 | 6 |
| 16 |
|
SV Sandhausen | 8 | 1 | 3 | 4 | 7:14 | -7 | 6 |
| 17 |
|
Erzgebirge Aue | 8 | 1 | 2 | 5 | 4:11 | -7 | 5 |
| 18 |
|
MSV Duisburg | 8 | 0 | 2 | 6 | 5:19 | -14 | 2 |
| Promotie | |
| Promotie en degradatie | |
| Degradatie | |
| Promotie en degradatie | |
| Degradatie |
